Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate-l-alanine ligase | HMPREF9695_03008 | Not Available | - | 3181673 - 3183118 | 51864.4 |
| multidrug resistance protein | HMPREF9695_03009 | Not Available | - | 3183223 - 3184413 | 40737.1 |
| hypothetical protein | HMPREF9695_03010 | Not Available | + | 3184527 - 3185432 | 32882.0 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | HMPREF9695_03011 | Not Available | - | 3185433 - 3186533 | 38099.9 |
| cell division protein ftsw | HMPREF9695_03012 | Not Available | - | 3186544 - 3187695 | 41553.2 |
| udp-n-acetylmuramoylalanine-d-glutamate ligase | HMPREF9695_03013 | Not Available | - | 3187993 - 3189390 | 48974.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | HMPREF9695_03014 | Not Available | - | 3189395 - 3190480 | 38963.8 |
| udp-n-acetylmuramoyl-tripeptide-d-alanyl-d- alanine ligase | HMPREF9695_03015 | Not Available | - | 3190491 - 3191927 | 49479.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate-2, 6-diaminopimelate ligase | HMPREF9695_03016 | Not Available | - | 3191924 - 3193372 | 50378.2 |
| hypothetical protein | HMPREF9695_03017 | Not Available | - | 3193464 - 3195203 | 63551.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
