Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna ligase | HMPREF9695_02998 | Not Available | - | 3168415 - 3170574 | 78363.7 |
| dna repair protein recn | HMPREF9695_02999 | Not Available | - | 3170583 - 3172256 | 59463.1 |
| outer membrane assembly lipoprotein yfio | HMPREF9695_03000 | Not Available | - | 3172283 - 3173176 | 33274.4 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | HMPREF9695_03001 | Not Available | - | 3173450 - 3174409 | 33760.2 |
| cell division protein ftsz | HMPREF9695_03002 | Not Available | - | 3174772 - 3176529 | 61501.5 |
| cell division protein ftsa | HMPREF9695_03003 | Not Available | - | 3176617 - 3177939 | 46302.1 |
| hypothetical protein | HMPREF9695_03004 | Not Available | - | 3177936 - 3178751 | 29556.8 |
| d-alanine-d-alanine ligase | HMPREF9695_03005 | Not Available | - | 3178889 - 3179815 | 33308.2 |
| hypothetical protein | HMPREF9695_03006 | Not Available | + | 3179940 - 3180737 | 28604.9 |
| udp-n-acetylenolpyruvoylglucosamine reductase | HMPREF9695_03007 | Not Available | - | 3180748 - 3181671 | 32930.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
