Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | HMPREF9695_02969 | Not Available | - | 3135853 - 3136647 | 30019.9 |
| hypothetical protein | HMPREF9695_02970 | Not Available | - | 3136846 - 3137832 | 34117.4 |
| hypothetical protein | HMPREF9695_02971 | Not Available | - | 3137961 - 3139475 | 52790.6 |
| hypothetical protein | HMPREF9695_02972 | Not Available | - | 3139483 - 3139977 | 17163.5 |
| hypothetical protein | HMPREF9695_02973 | Not Available | - | 3140064 - 3140597 | 18239.8 |
| hypothetical protein | HMPREF9695_02974 | Not Available | - | 3140594 - 3141196 | 21473.2 |
| Tmrna,resume consensus sequence (at 209): aatagttgcaaacgacaa | Not Available | Not Available | + | 3141363 - 3141707 | Not Available |
| hypothetical protein | HMPREF9695_02975 | Not Available | + | 3141890 - 3142393 | 18451.9 |
| fumarate hydratase class ii 1 | HMPREF9695_02976 | Not Available | + | 3142540 - 3143943 | 50690.3 |
| hypothetical protein | HMPREF9695_02977 | Not Available | + | 3144202 - 3144390 | 7170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
