Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase, large subunit, biosynthetic type | HMPREF9695_02959 | Not Available | - | 3126656 - 3128434 | 64608.1 |
| hypothetical protein | HMPREF9695_02960 | Not Available | - | 3128667 - 3128783 | 3993.88 |
| hypothetical protein | HMPREF9695_02961 | Not Available | + | 3128833 - 3129261 | 15013.6 |
| trna dimethylallyltransferase | HMPREF9695_02962 | Not Available | - | 3129263 - 3130204 | 34260.4 |
| phosphoserine phosphatase serb | HMPREF9695_02963 | Not Available | + | 3130214 - 3131107 | 31776.4 |
| protease do | HMPREF9695_02964 | Not Available | - | 3131187 - 3132701 | 53104.3 |
| hypothetical protein | HMPREF9695_02965 | Not Available | - | 3132857 - 3133057 | 7064.06 |
| hflc protein | HMPREF9695_02966 | Not Available | - | 3133100 - 3133999 | 33531.1 |
| hflk protein | HMPREF9695_02967 | Not Available | - | 3133996 - 3135138 | 41466.8 |
| hypothetical protein | HMPREF9695_02968 | Not Available | - | 3135320 - 3135856 | 19445.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
