Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02940 | Not Available | - | 3106548 - 3107651 | 42184.0 |
| hypothetical protein | HMPREF9695_02941 | Not Available | - | 3107653 - 3108705 | 39833.9 |
| hypothetical protein | HMPREF9695_02942 | Not Available | - | 3108740 - 3109717 | 34428.0 |
| pcar/pcau/pobr family beta-ketoadipate pathway transcriptional regulator | HMPREF9695_02943 | Not Available | + | 3109803 - 3110615 | 29657.0 |
| Trna-lys | Not Available | Not Available | + | 3111056 - 3111131 | Not Available |
| hypothetical protein | HMPREF9695_02944 | Not Available | - | 3111312 - 3111902 | 21683.6 |
| trap transporter, dctm subunit | HMPREF9695_02945 | Not Available | - | 3111990 - 3113318 | 47338.4 |
| hypothetical protein | HMPREF9695_02946 | Not Available | - | 3113315 - 3113914 | 22202.2 |
| c4-dicarboxylate-binding periplasmic protein | HMPREF9695_02947 | Not Available | - | 3114053 - 3115054 | 36312.1 |
| 2-isopropylmalate synthase | HMPREF9695_02948 | Not Available | - | 3115250 - 3116815 | 57220.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
