Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02930 | Not Available | - | 3097811 - 3099268 | 54182.6 |
| hypothetical protein | HMPREF9695_02931 | Not Available | - | 3099284 - 3100642 | 51612.5 |
| hypothetical protein | HMPREF9695_02932 | Not Available | + | 3101087 - 3101410 | 11101.3 |
| hypothetical protein | HMPREF9695_02933 | Not Available | + | 3101407 - 3102645 | 44539.0 |
| pcar/pcau/pobr family beta-ketoadipate pathway transcriptional regulator | HMPREF9695_02934 | Not Available | + | 3102682 - 3103506 | 29631.9 |
| hypothetical protein | HMPREF9695_02935 | Not Available | - | 3103503 - 3103871 | 13548.4 |
| hypothetical protein | HMPREF9695_02936 | Not Available | + | 3104106 - 3105020 | 31931.3 |
| hypothetical protein | HMPREF9695_02937 | Not Available | - | 3105058 - 3105696 | 22692.3 |
| hypothetical protein | HMPREF9695_02938 | Not Available | - | 3105766 - 3106086 | 11698.9 |
| hypothetical protein | HMPREF9695_02939 | Not Available | - | 3106132 - 3106545 | 15450.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
