Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02920 | Not Available | - | 3087255 - 3089618 | 86767.0 |
| hypothetical protein | HMPREF9695_02921 | Not Available | + | 3089752 - 3090213 | 17352.2 |
| protocatechuate 3,4-dioxygenase, alpha subunit | HMPREF9695_02922 | Not Available | - | 3090223 - 3090810 | 21194.9 |
| protocatechuate 3,4-dioxygenase, beta subunit | HMPREF9695_02923 | Not Available | - | 3090810 - 3091511 | 26344.2 |
| hypothetical protein | HMPREF9695_02924 | Not Available | - | 3091554 - 3092267 | 25884.7 |
| hypothetical protein | HMPREF9695_02925 | Not Available | - | 3092248 - 3093012 | 27650.7 |
| hypothetical protein | HMPREF9695_02926 | Not Available | - | 3093009 - 3094010 | 35023.8 |
| hypothetical protein | HMPREF9695_02927 | Not Available | - | 3094012 - 3094878 | 30767.9 |
| hypothetical protein | HMPREF9695_02928 | Not Available | - | 3094878 - 3096503 | 58290.3 |
| hypothetical protein | HMPREF9695_02929 | Not Available | - | 3096581 - 3097756 | 41684.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
