Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase i | HMPREF9695_02830 | Not Available | - | 2985013 - 2985963 | 34831.9 |
| udp-glucose 4-epimerase | HMPREF9695_02831 | Not Available | + | 2986173 - 2987186 | 36299.1 |
| hypothetical protein | HMPREF9695_02832 | Not Available | + | 2987306 - 2989108 | 65544.7 |
| hypothetical protein | HMPREF9695_02833 | Not Available | + | 2989153 - 2989842 | 24566.6 |
| hypothetical protein | HMPREF9695_02834 | Not Available | - | 2989967 - 2991262 | 44807.8 |
| hypothetical protein | HMPREF9695_02835 | Not Available | - | 2992127 - 2992798 | 22898.3 |
| hypothetical protein | HMPREF9695_02836 | Not Available | - | 2992798 - 2993322 | 18852.6 |
| hypothetical protein | HMPREF9695_02837 | Not Available | - | 2993331 - 2993801 | 16914.8 |
| hypothetical protein | HMPREF9695_02838 | Not Available | - | 2993818 - 2994165 | 12218.8 |
| hypothetical protein | HMPREF9695_02839 | Not Available | + | 2994316 - 2996046 | 63175.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
