Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02820 | Not Available | - | 2974202 - 2974576 | 13963.7 |
| hypothetical protein | HMPREF9695_02821 | Not Available | + | 2974812 - 2975660 | 31567.8 |
| hypothetical protein | HMPREF9695_02822 | Not Available | + | 2975679 - 2976692 | 35488.6 |
| hypothetical protein | HMPREF9695_02823 | Not Available | - | 2976694 - 2978619 | 70444.5 |
| hypothetical protein | HMPREF9695_02824 | Not Available | - | 2978622 - 2979899 | 45587.1 |
| hlde protein | HMPREF9695_02825 | Not Available | - | 2979896 - 2981368 | 52359.1 |
| adp-glyceromanno-heptose 6-epimerase | HMPREF9695_02826 | Not Available | - | 2981414 - 2982394 | 36216.2 |
| lipopolysaccharide heptosyltransferase ii | HMPREF9695_02827 | Not Available | + | 2982757 - 2983818 | 38293.6 |
| phosphoheptose isomerase | HMPREF9695_02828 | Not Available | + | 2983897 - 2984490 | 20802.9 |
| d,d-heptose 1,7-bisphosphate phosphatase | HMPREF9695_02829 | Not Available | + | 2984487 - 2985023 | 20039.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
