Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02810 | Not Available | + | 2964045 - 2964950 | 33347.6 |
| hypothetical protein | HMPREF9695_02811 | Not Available | - | 2964965 - 2965708 | 27743.1 |
| cdp-glucose 4,6-dehydratase | HMPREF9695_02812 | Not Available | + | 2965884 - 2966933 | 38299.5 |
| hypothetical protein | HMPREF9695_02813 | Not Available | + | 2966930 - 2968153 | 44950.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF9695_02814 | Not Available | + | 2968161 - 2968694 | 20086.8 |
| hypothetical protein | HMPREF9695_02815 | Not Available | - | 2968703 - 2970436 | 61730.4 |
| transcriptional activator rfah | HMPREF9695_02816 | Not Available | - | 2970493 - 2971011 | 19306.4 |
| hypothetical protein | HMPREF9695_02817 | Not Available | - | 2971008 - 2971667 | 23812.7 |
| hypothetical protein | HMPREF9695_02818 | Not Available | - | 2971840 - 2972892 | 39057.6 |
| hypothetical protein | HMPREF9695_02819 | Not Available | + | 2973029 - 2974174 | 40665.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
