Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 4,6-dehydratase | HMPREF9695_02800 | Not Available | - | 2952356 - 2953411 | 38764.0 |
| hypothetical protein | HMPREF9695_02801 | Not Available | - | 2953788 - 2955077 | 47494.8 |
| hypothetical protein | HMPREF9695_02802 | Not Available | - | 2955153 - 2955833 | 24792.1 |
| hypothetical protein | HMPREF9695_02803 | Not Available | - | 2955815 - 2956891 | 39352.8 |
| dtdp-4-dehydrorhamnose reductase | HMPREF9695_02804 | Not Available | - | 2956888 - 2957763 | 31070.2 |
| hypothetical protein | HMPREF9695_02805 | Not Available | - | 2957818 - 2959809 | 74515.6 |
| hypothetical protein | HMPREF9695_02806 | Not Available | + | 2960006 - 2960839 | 30625.1 |
| glucose-1-phosphate cytidylyltransferase | HMPREF9695_02807 | Not Available | - | 2960919 - 2961689 | 28694.5 |
| hypothetical protein | HMPREF9695_02808 | Not Available | - | 2961686 - 2962684 | 37790.1 |
| hypothetical protein | HMPREF9695_02809 | Not Available | + | 2962885 - 2964048 | 42437.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
