Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02780 | Not Available | - | 2926896 - 2927345 | 16172.4 |
| carbon-monoxide dehydrogenase, large subunit | HMPREF9695_02781 | Not Available | - | 2927461 - 2929761 | 81845.9 |
| integral membrane protein mvin | HMPREF9695_02782 | Not Available | - | 2929834 - 2931363 | 53754.1 |
| hypothetical protein | HMPREF9695_02783 | Not Available | - | 2931532 - 2932677 | 40839.0 |
| hypothetical protein | HMPREF9695_02784 | Not Available | - | 2932720 - 2933736 | 35762.2 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMPREF9695_02785 | Not Available | - | 2933914 - 2935326 | 51667.8 |
| hypothetical protein | HMPREF9695_02786 | Not Available | - | 2935351 - 2936367 | 37547.8 |
| nucleotide sugar dehydrogenase | HMPREF9695_02787 | Not Available | - | 2936387 - 2937670 | 46420.9 |
| hypothetical protein | HMPREF9695_02788 | Not Available | + | 2937888 - 2938850 | 34397.1 |
| hypothetical protein | HMPREF9695_02789 | Not Available | - | 2938917 - 2940356 | 54257.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
