Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_02730 | Not Available | + | 2873673 - 2874821 | 40336.2 |
| hypothetical protein | HMPREF9695_02731 | Not Available | - | 2874837 - 2875034 | 6912.35 |
| rna polymerase-binding protein dksa | HMPREF9695_02732 | Not Available | - | 2875162 - 2875527 | 14543.0 |
| hypothetical protein | HMPREF9695_02733 | Not Available | - | 2875783 - 2876190 | 14088.5 |
| flagellar p-ring protein | HMPREF9695_02734 | Not Available | + | 2876498 - 2877607 | 38283.5 |
| hypothetical protein | HMPREF9695_02735 | Not Available | + | 2877607 - 2877948 | 12129.3 |
| hypothetical protein | HMPREF9695_02736 | Not Available | + | 2877968 - 2878456 | 17737.3 |
| hypothetical protein | HMPREF9695_02737 | Not Available | + | 2878701 - 2879063 | 13284.7 |
| hypothetical protein | HMPREF9695_02738 | Not Available | - | 2879060 - 2879425 | 13218.4 |
| hypothetical protein | HMPREF9695_02739 | Not Available | - | 2879446 - 2879805 | 13052.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
