Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | HMPREF9695_02710 | Not Available | - | 2853774 - 2856335 | 92965.2 |
| flagellar biosynthetic protein flhb | HMPREF9695_02711 | Not Available | - | 2856493 - 2857566 | 39545.0 |
| flagellar biosynthetic protein flir | HMPREF9695_02712 | Not Available | - | 2857576 - 2858346 | 26897.2 |
| flagellar biosynthetic protein fliq | HMPREF9695_02713 | Not Available | - | 2858418 - 2858681 | 9274.81 |
| flagellar hook-basal body complex protein flie | HMPREF9695_02714 | Not Available | - | 2858719 - 2859039 | 10680.9 |
| flagellar basal-body rod protein flgc | HMPREF9695_02715 | Not Available | - | 2859057 - 2859479 | 15473.3 |
| flagellar basal-body rod protein flgb | HMPREF9695_02716 | Not Available | - | 2859511 - 2859921 | 14554.3 |
| hypothetical protein | HMPREF9695_02717 | Not Available | + | 2860241 - 2861233 | 35353.5 |
| flagellar biosynthetic protein flip | HMPREF9695_02718 | Not Available | + | 2861230 - 2861988 | 27077.1 |
| hypothetical protein | HMPREF9695_02719 | Not Available | - | 2862113 - 2865772 | 132334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
