Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| monovalent cation:proton antiporter-2 (cpa2) family transporter | HMPREF9695_02660 | Not Available | - | 2812828 - 2814600 | 61503.7 |
| hypothetical protein | HMPREF9695_02661 | Not Available | + | 2814711 - 2815214 | 17293.6 |
| alanyl-trna synthetase | HMPREF9695_02662 | Not Available | - | 2815221 - 2817884 | 96033.3 |
| glycine cleavage system t protein | HMPREF9695_02663 | Not Available | + | 2818420 - 2819595 | 41551.0 |
| glycine cleavage system h protein | HMPREF9695_02664 | Not Available | + | 2819618 - 2819983 | 12922.3 |
| glycine dehydrogenase | HMPREF9695_02665 | Not Available | + | 2820008 - 2822875 | 102884.0 |
| protein reca | HMPREF9695_02666 | Not Available | - | 2823255 - 2824343 | 38768.8 |
| hypothetical protein | HMPREF9695_02667 | Not Available | + | 2824896 - 2825072 | 6510.31 |
| hypothetical protein | HMPREF9695_02668 | Not Available | + | 2825387 - 2825623 | 9105.72 |
| hypothetical protein | HMPREF9695_02669 | Not Available | + | 2825885 - 2826055 | 6474.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
