Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02630 | Not Available | + | 2780622 - 2781179 | 20115.9 |
| glutamate racemase | HMPREF9695_02631 | Not Available | + | 2781204 - 2781995 | 27944.7 |
| hypothetical protein | HMPREF9695_02632 | Not Available | + | 2782076 - 2782474 | 13645.8 |
| 30s ribosomal protein s4 | HMPREF9695_02633 | Not Available | + | 2782675 - 2783292 | 23473.4 |
| hypothetical protein | HMPREF9695_02634 | Not Available | - | 2783363 - 2784508 | 41072.2 |
| outer membrane autotransporter barrel domain-containing protein | HMPREF9695_02635 | Not Available | + | 2784691 - 2787426 | 91753.6 |
| hypothetical protein | HMPREF9695_02636 | Not Available | - | 2787427 - 2788716 | 46482.9 |
| hypothetical protein | HMPREF9695_02637 | Not Available | - | 2788788 - 2790107 | 48048.7 |
| grx4 family monothiol glutaredoxin | HMPREF9695_02638 | Not Available | - | 2790217 - 2790552 | 12217.8 |
| tigr03440 family protein | HMPREF9695_02639 | Not Available | + | 2790852 - 2792123 | 47800.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
