Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02580 | Not Available | Negative | 2733054 - 2734022 | 36178.2 |
| hypothetical protein | HMPREF9695_02581 | Not Available | Positive | 2734332 - 2735201 | 30148.4 |
| hypothetical protein | HMPREF9695_02582 | Not Available | Negative | 2735237 - 2735551 | 11283.9 |
| hypothetical protein | HMPREF9695_02583 | Not Available | Positive | 2735686 - 2736438 | 25439.6 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_02584 | Not Available | Negative | 2736549 - 2738639 | 75289.4 |
| hypothetical protein | HMPREF9695_02585 | Not Available | Positive | 2738861 - 2739118 | 9304.06 |
| hypothetical protein | HMPREF9695_02586 | Not Available | Positive | 2739822 - 2740100 | 10513.7 |
| hypothetical protein | HMPREF9695_02587 | Not Available | Positive | 2740238 - 2740963 | 28014.8 |
| hypothetical protein | HMPREF9695_02588 | Not Available | Positive | 2741152 - 2742249 | 41341.1 |
| hypothetical protein | HMPREF9695_02589 | Not Available | Positive | 2743206 - 2744384 | 43195.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.