Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02531 | Not Available | + | 2687825 - 2688178 | 13086.7 |
| hypothetical protein | HMPREF9695_02532 | Not Available | - | 2688167 - 2689270 | 38683.6 |
| threonyl-trna synthetase | HMPREF9695_02533 | Not Available | + | 2689562 - 2691598 | 76594.5 |
| hypothetical protein | HMPREF9695_02534 | Not Available | + | 2691719 - 2692282 | 20565.8 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_02535 | Not Available | - | 2692380 - 2694851 | 91494.9 |
| hypothetical protein | HMPREF9695_02536 | Not Available | - | 2695032 - 2696084 | 36457.6 |
| hypothetical protein | HMPREF9695_02537 | Not Available | + | 2696405 - 2697397 | 34849.9 |
| hypothetical protein | HMPREF9695_02538 | Not Available | - | 2697520 - 2697948 | 15592.2 |
| hypothetical protein | HMPREF9695_02539 | Not Available | - | 2698153 - 2698992 | 29791.5 |
| hypothetical protein | HMPREF9695_02540 | Not Available | + | 2699405 - 2699971 | 20669.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
