Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02503 | Not Available | + | 2665576 - 2665866 | 10621.6 |
| hypothetical protein | HMPREF9695_02504 | Not Available | - | 2665937 - 2666263 | 11907.6 |
| Trna-tyr | Not Available | Not Available | + | 2666362 - 2666447 | Not Available |
| rna methyltransferase, trmh family, group 3 | HMPREF9695_02505 | Not Available | + | 2666665 - 2667546 | 31419.9 |
| hypothetical protein | HMPREF9695_02506 | Not Available | - | 2667607 - 2668179 | 21341.7 |
| hypothetical protein | HMPREF9695_02507 | Not Available | - | 2668217 - 2668708 | 17664.9 |
| hypothetical protein | HMPREF9695_02508 | Not Available | + | 2669009 - 2669158 | 5902.82 |
| Trna-thr | Not Available | Not Available | + | 2669185 - 2669259 | Not Available |
| hypothetical protein | HMPREF9695_02509 | Not Available | + | 2669539 - 2669742 | 7352.37 |
| hypothetical protein | HMPREF9695_02510 | Not Available | + | 2669828 - 2669959 | 4665.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
