Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | HMPREF9695_02355 | Not Available | - | 2504476 - 2504847 | 13878.1 |
| hypothetical protein | HMPREF9695_02356 | Not Available | - | 2505567 - 2506697 | 41626.1 |
| hypothetical protein | HMPREF9695_02357 | Not Available | + | 2506958 - 2508124 | 42655.6 |
| hypothetical protein | HMPREF9695_02358 | Not Available | - | 2508140 - 2510101 | 72066.4 |
| hypothetical protein | HMPREF9695_02359 | Not Available | - | 2510179 - 2512233 | 76672.3 |
| hypothetical protein | HMPREF9695_02360 | Not Available | + | 2512913 - 2513191 | 10513.7 |
| hypothetical protein | HMPREF9695_02361 | Not Available | + | 2513329 - 2514054 | 28014.8 |
| hypothetical protein | HMPREF9695_02362 | Not Available | - | 2514072 - 2514908 | 30605.6 |
| dna-directed rna polymerase subunit beta' | HMPREF9695_02363 | Not Available | - | 2515107 - 2519306 | 155627.0 |
| dna-directed rna polymerase subunit beta | HMPREF9695_02364 | Not Available | - | 2519433 - 2523551 | 153647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
