Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l6 | HMPREF9695_02335 | Not Available | - | 2492760 - 2493293 | 19228.4 |
| 30s ribosomal protein s8 | HMPREF9695_02336 | Not Available | - | 2493307 - 2493705 | 14589.6 |
| 30s ribosomal protein s14 | HMPREF9695_02337 | Not Available | - | 2493720 - 2494025 | 11439.1 |
| 50s ribosomal protein l5 | HMPREF9695_02338 | Not Available | - | 2494078 - 2494635 | 20613.0 |
| 50s ribosomal protein l24 | HMPREF9695_02339 | Not Available | - | 2494628 - 2494942 | 11325.9 |
| 50s ribosomal protein l14 | HMPREF9695_02340 | Not Available | - | 2494942 - 2495310 | 13404.8 |
| 30s ribosomal protein s17 | HMPREF9695_02341 | Not Available | - | 2495350 - 2495595 | 9564.5 |
| 50s ribosomal protein l29 | HMPREF9695_02342 | Not Available | - | 2495606 - 2495815 | 8057.8 |
| 50s ribosomal protein l16 | HMPREF9695_02343 | Not Available | - | 2495821 - 2496234 | 15145.9 |
| 30s ribosomal protein s3 | HMPREF9695_02344 | Not Available | - | 2496268 - 2496969 | 26198.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

