Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_02207 | Not Available | + | 2374414 - 2374533 | 4192.05 |
| hypothetical protein | HMPREF9695_02208 | Not Available | + | 2374626 - 2375456 | 29674.7 |
| nitrilotriacetate monooxygenase family fmn-dependent oxidoreductase | HMPREF9695_02209 | Not Available | + | 2375617 - 2376966 | 49556.9 |
| 50s ribosomal protein l33 | HMPREF9695_02210 | Not Available | + | 2377141 - 2377308 | 6290.84 |
| hypothetical protein | HMPREF9695_02211 | Not Available | - | 2377389 - 2378267 | 32404.6 |
| hypothetical protein | HMPREF9695_02212 | Not Available | + | 2378433 - 2379158 | 26920.5 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_02213 | Not Available | - | 2379155 - 2380528 | 50647.2 |
| polar-differentiation response regulator divk | HMPREF9695_02214 | Not Available | - | 2380547 - 2380912 | 13551.5 |
| hypothetical protein | HMPREF9695_02215 | Not Available | + | 2381039 - 2381323 | 10127.0 |
| hypothetical protein | HMPREF9695_02216 | Not Available | + | 2381289 - 2382614 | 48492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
