Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate acyltransferase | HMPREF9695_02197 | Not Available | + | 2362682 - 2363290 | 21015.5 |
| hypothetical protein | HMPREF9695_02198 | Not Available | - | 2363314 - 2364885 | 56703.8 |
| dna protecting protein dpra | HMPREF9695_02199 | Not Available | + | 2365097 - 2366221 | 39519.4 |
| hypothetical protein | HMPREF9695_02200 | Not Available | - | 2366222 - 2366995 | 26243.6 |
| hypothetical protein | HMPREF9695_02201 | Not Available | + | 2367110 - 2367559 | 16389.0 |
| hypothetical protein | HMPREF9695_02202 | Not Available | - | 2367556 - 2367780 | 8099.68 |
| dna topoisomerase i | HMPREF9695_02203 | Not Available | + | 2368022 - 2370793 | 100859.0 |
| ribonuclease r | HMPREF9695_02204 | Not Available | + | 2370793 - 2373120 | 85411.5 |
| hypothetical protein | HMPREF9695_02205 | Not Available | + | 2373172 - 2373639 | 17099.0 |
| hypothetical protein | HMPREF9695_02206 | Not Available | + | 2373636 - 2374370 | 26605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
