Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 2344613 - 2344704 | Not Available |
| hypothetical protein | HMPREF9695_02178 | Not Available | - | 2344932 - 2345198 | 9447.4 |
| hypothetical protein | HMPREF9695_02179 | Not Available | - | 2345984 - 2346076 | 3341.44 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | HMPREF9695_02180 | Not Available | - | 2346672 - 2348156 | 53771.3 |
| hypothetical protein | HMPREF9695_02181 | Not Available | - | 2348205 - 2349590 | 49375.8 |
| glutamyl-trna(gln) amidotransferase subunit a | HMPREF9695_02182 | Not Available | - | 2349720 - 2351198 | 52357.4 |
| hypothetical protein | HMPREF9695_02183 | Not Available | - | 2351199 - 2351387 | 6991.29 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | HMPREF9695_02184 | Not Available | - | 2351405 - 2351692 | 10399.5 |
| hypothetical protein | HMPREF9695_02185 | Not Available | - | 2351820 - 2352395 | 21115.7 |
| hypothetical protein | HMPREF9695_02186 | Not Available | - | 2352414 - 2353592 | 40379.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
