Agrobacterium tumefaciens 5A

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens 5A is a Gram-negative, rod-shaped bacterium that thrives in a variety of habitats, demonstrating its adaptability to multiple environmental conditions. This microbe is classified as an aerobe, indicating that it requires oxygen for its metabolic processes, and it exhibits optimal growth at a temperature of 25.0°C. The ability of Agrobacterium tumefaciens 5A to thrive in diverse environments suggests a broad ecological versatility, potentially allowing it to interact with various plant species and soil types. This adaptability may play a significant role in its ecological niche, where it might contribute to soil health and nutrient cycling. The aerobic nature of this organism implies that it may be involved in aerobic degradation processes, which could be beneficial in bioremediation or agricultural contexts. Overall, the traits of Agrobacterium tumefaciens 5A highlight its ecological importance, particularly in environments where oxygen is available, and its potential contributions to both natural ecosystems and agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strain5A

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens 5A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens 5A


Gene Summary

Adenine Count

1190263 bp

Thymine Count

1188533 bp

Guanine Count

1673681 bp

Cytosine Count

1690631 bp

Genome Length

5743108 bp

Protein-coding Genes

5415 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative tail proteinAT5A_04705Not AvailablePositive1001382 - 100177714271.5
mfs permeaseAT5A_04710Not AvailableNegative1001785 - 100298441561.4
Gene transfer aget (gta) orfg9-like phage major tail proteinAT5A_04715Not AvailablePositive1003092 - 100349914297.0
hypothetical proteinAT5A_04720Not AvailablePositive1003499 - 100385512264.6
hypothetical proteinAT5A_04725Not AvailablePositive1003873 - 10040737615.27
Putative tail tape measure proteinAT5A_04730Not AvailablePositive1004171 - 100475218847.6
Tail proteinAT5A_04735Not AvailablePositive1004843 - 100548122868.2
Minor tail proteinAT5A_04740Not AvailablePositive1005478 - 100636230890.1
Phage cell wall peptidaseAT5A_04745Not AvailablePositive1006359 - 100679316056.3
Tail proteinAT5A_04750Not AvailablePositive1006811 - 1010614137138.0

Displaying genes 11 – 20 of 5576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.