Agrobacterium tumefaciens 5A

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens 5A is a Gram-negative, rod-shaped bacterium that thrives in a variety of habitats, demonstrating its adaptability to multiple environmental conditions. This microbe is classified as an aerobe, indicating that it requires oxygen for its metabolic processes, and it exhibits optimal growth at a temperature of 25.0°C. The ability of Agrobacterium tumefaciens 5A to thrive in diverse environments suggests a broad ecological versatility, potentially allowing it to interact with various plant species and soil types. This adaptability may play a significant role in its ecological niche, where it might contribute to soil health and nutrient cycling. The aerobic nature of this organism implies that it may be involved in aerobic degradation processes, which could be beneficial in bioremediation or agricultural contexts. Overall, the traits of Agrobacterium tumefaciens 5A highlight its ecological importance, particularly in environments where oxygen is available, and its potential contributions to both natural ecosystems and agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strain5A

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens 5A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens 5A


Gene Summary

Adenine Count

1190263 bp

Thymine Count

1188533 bp

Guanine Count

1673681 bp

Cytosine Count

1690631 bp

Genome Length

5743108 bp

Protein-coding Genes

5415 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAT5A_09200Not AvailablePositive1907783 - 190839123189.7
IntegraseAT5A_09205Not AvailableNegative1908400 - 190963244480.4
AttrNot AvailableNot AvailablePositive1909804 - 1909849Not Available
Hypothetical proteinAT5A_14522Not AvailableNegative3004773 - 300542623123.9
Hypothetical proteinAT5A_14527Not AvailableNegative3005423 - 300584815638.5
P050AT5A_14532Not AvailableNegative3005845 - 300612310292.4
P048AT5A_14537Not AvailableNegative3006335 - 300721332689.6
hypothetical proteinAT5A_14542Not AvailablePositive3007290 - 30075388786.45
P044AT5A_14547Not AvailableNegative3007535 - 300878545768.7
P036AT5A_14552Not AvailableNegative3008841 - 300950622630.7

Displaying genes 71 – 80 of 5576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.