Agrobacterium tumefaciens 5A

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens 5A is a Gram-negative, rod-shaped bacterium that thrives in a variety of habitats, demonstrating its adaptability to multiple environmental conditions. This microbe is classified as an aerobe, indicating that it requires oxygen for its metabolic processes, and it exhibits optimal growth at a temperature of 25.0°C. The ability of Agrobacterium tumefaciens 5A to thrive in diverse environments suggests a broad ecological versatility, potentially allowing it to interact with various plant species and soil types. This adaptability may play a significant role in its ecological niche, where it might contribute to soil health and nutrient cycling. The aerobic nature of this organism implies that it may be involved in aerobic degradation processes, which could be beneficial in bioremediation or agricultural contexts. Overall, the traits of Agrobacterium tumefaciens 5A highlight its ecological importance, particularly in environments where oxygen is available, and its potential contributions to both natural ecosystems and agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strain5A

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens 5A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens 5A


Gene Summary

Adenine Count

1190263 bp

Thymine Count

1188533 bp

Guanine Count

1673681 bp

Cytosine Count

1690631 bp

Genome Length

5743108 bp

Protein-coding Genes

5415 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Large packaging proteinAT5A_04655Not Available+993851 - 99511045810.1
hypothetical proteinAT5A_04660Not Available-995241 - 9953484133.89
Hypothetical proteinAT5A_04665Not Available+995513 - 99619925333.4
hypothetical proteinAT5A_04670Not Available+996242 - 99656511866.0
Portal proteinAT5A_04675Not Available+996752 - 99791842392.6
hypothetical proteinAT5A_04680Not Available+998106 - 99842611023.5
Putative prohead proteaseAT5A_04685Not Available+998468 - 99905821983.5
Major capsid proteinAT5A_04690Not Available+999096 - 100036445600.1
Dna packaging/head-tail-connectorAT5A_04695Not Available+1000477 - 100104620663.2
Head-tail connector complex proteinAT5A_04700Not Available+1001050 - 100138512541.0

Displaying genes 1 – 10 of 5576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites