Desulfovibrio sp. A2

Gram-negative

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesDesulfovibrio sp. A2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio sp. A2

AGFG00000000.1

Gene Summary

Adenine Count

681604 bp

Thymine Count

679072 bp

Guanine Count

1396028 bp

Cytosine Count

1393981 bp

Genome Length

4150685 bp

Protein-coding Genes

3810 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Baseplate j proteinDA2_0713P44240Positive711864 - 71292536502.8
Tail proteinDA2_0714P75982Positive712922 - 71349120627.7
Short tail fiber proteinDA2_0715Not AvailablePositive713510 - 71437629925.9
hypothetical proteinDA2_0716Not AvailablePositive714386 - 71494919941.2
hypothetical proteinDA2_0717Not AvailablePositive715260 - 7154215743.87
Dna methylaseDA2_0718Q9S4X2Positive715435 - 71615726153.4
Hypothetical proteinDA2_3193Q9XJR2Positive3384663 - 338507014911.9
hypothetical proteinDA2_3194Not AvailablePositive3385067 - 338548314801.9
hypothetical proteinDA2_3195Not AvailablePositive3385525 - 33857317979.71
phage terminase, small subunit, p27 familyDA2_3196Not AvailablePositive3386866 - 338719811972.2

Displaying genes 61 – 70 of 3944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

177 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da

Displaying 1–10 of 177 metabolites

Health Effects

No health effects information available for this bacterium.