Peptoniphilus indolicus ATCC 29427

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Tissierellia

Order

Tissierellales

Family

Peptoniphilaceae

Genus

Peptoniphilus

Description

Peptoniphilus indolicus ATCC 29427 is a Gram-positive anaerobic bacterium characterized by its ability to thrive in environments devoid of oxygen. This microbe is part of the Peptoniphilus genus, which is known for its role in the human microbiome, particularly in the gastrointestinal tract. As an anaerobe, P. indolicus relies on fermentation processes for energy production, which is typical of many gut-associated bacteria. The metabolic capabilities of P. indolicus suggest it may be involved in the breakdown of complex carbohydrates and proteins, contributing to the overall microbial ecosystem and nutrient cycling within its habitat. Its anaerobic nature indicates a potential adaptation to the low-oxygen environments commonly found in the intestines, where it may interact with other microbial species, influencing community dynamics and metabolic functions. Furthermore, the presence of P. indolicus in human-associated environments highlights its potential role in maintaining gut health, although the specific interactions and impacts on host physiology require further investigation. This bacterium exemplifies the intricate relationships that exist within the microbiome, where anaerobic organisms perform essential functions that support both microbial diversity and host well-being. Understanding the specific contributions of P. indolicus to gut metabolism could provide insights into the broader implications of anaerobic bacteria in human health and disease.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassTissierellia
OrderTissierellales
FamilyPeptoniphilaceae
GenusPeptoniphilus
SpeciesPeptoniphilus indolicus
StrainATCC 29427

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptoniphilus indolicus ATCC 29427


Gene Summary

Adenine Count

736315 bp

Thymine Count

699329 bp

Guanine Count

348034 bp

Cytosine Count

317952 bp

Genome Length

2101630 bp

Protein-coding Genes

2231 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hicb family toxin-antitoxin systemHMPREF9129_1687Not Available-1605252 - 16054166501.96
hypothetical proteinHMPREF9129_1688Not Available-1605508 - 16056756506.97
hypothetical proteinHMPREF9129_1689Not Available+1605788 - 16059586730.88
Putative transcriptional regulator proteinHMPREF9129_1690Not Available-1606172 - 16063577044.55
Immunity repressor proteinHMPREF9129_1691Not Available+1606473 - 160709323896.8
Orf031HMPREF9129_1692Not Available+1607153 - 160760217721.1
Hypothetical proteinHMPREF9129_1693Not Available+1607611 - 160795513046.7
Ncrna_class:autocatalytically_spliced_intronNot AvailableNot Available+1 - 97Not Available
5s ribosomal rnaNot AvailableNot Available+4 - 118Not Available
16s ribosomal rnaNot AvailableNot Available+24 - 1341Not Available

Displaying genes 61 – 70 of 2303 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

180 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002026acrylateC3H3O2Chemical structure of acrylate10344-93-1
Average71.056Da
Monoisotopic71.013852917Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 180 metabolites