Leyella stercorea DSM 18206

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Leyella

Description

Leyella stercorea DSM 18206 is a Gram-negative bacterium belonging to the genus Leyella. This microorganism has been characterized for its distinct morphological and biochemical traits, although specific details beyond its Gram-negative nature are limited. The Gram-negative classification indicates that Leyella stercorea possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group and may influence its interactions with the environment. Due to the scarcity of additional detailed traits provided, further insights into its metabolic capabilities, environmental tolerances, or specific habitats remain unspecified. However, as a member of the microbial community, Leyella stercorea may play a role in the degradation of organic matter, particularly in environments where such bacteria are frequently found, such as in soil or decaying organic materials. The presence of Leyella stercorea in ecological niches rich in organic substrates suggests a potential contribution to nutrient cycling processes. This underscores the importance of Gram-negative bacteria in the decomposition of complex organic compounds, highlighting their role in maintaining ecosystem health and soil fertility. Further research would be necessary to elucidate the specific ecological functions and potential applications of Leyella stercorea in biotechnological contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusLeyella
SpeciesLeyella stercorea
StrainDSM 18206

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leyella stercorea DSM 18206


Gene Summary

Adenine Count

797182 bp

Thymine Count

780219 bp

Guanine Count

751604 bp

Cytosine Count

763664 bp

Genome Length

3092669 bp

Protein-coding Genes

3017 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
site-specific recombinase, phage integrase familyHMPREF0673_00001Q8RA66+267 - 143344193.7
site-specific recombinase, phage integrase familyHMPREF0673_00002Not Available+1458 - 261243583.2
5s ribosomal rnaNot AvailableNot Available+2115 - 2226Not Available
dna-binding helix-turn-helix proteinHMPREF0673_00003Not Available+2779 - 29857842.45
putative type-i restriction enzymeHMPREF0673_00004Not Available+3052 - 541289928.9
n-6 dna methylaseHMPREF0673_00005Not Available+5466 - 693856125.4
hypothetical proteinHMPREF0673_00006Not Available+6976 - 800139573.0
hypothetical proteinHMPREF0673_00007Not Available+8042 - 854818774.0
type i restriction modification dna specificity domain proteinHMPREF0673_00008Not Available+8564 - 1015959692.2
hypothetical proteinHMPREF0673_00009Not Available-10168 - 1058715530.9

Displaying genes 1 – 10 of 3068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

151 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 151 metabolites