SAR116 cluster alpha proteobacterium HIMB100

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Puniceispirillales

Family

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

SAR116 cluster alpha proteobacterium HIMB100


Gene Summary

Adenine Count

605406 bp

Thymine Count

612368 bp

Guanine Count

623379 bp

Cytosine Count

617792 bp

Genome Length

2458945 bp

Protein-coding Genes

2334 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
calx-beta domain-containing proteinHIMB100_00000010Not Available+1 - 209271663.1
hypothetical proteinHIMB100_00000020Not Available+2089 - 268220916.8
hypothetical proteinHIMB100_00000030Not Available+2795 - 324416828.2
eama-like transporter familyHIMB100_00000040Not Available-3293 - 419231959.1
methyltransferase family proteinHIMB100_00000050Not Available-4189 - 483924955.4
putative hd phosphohydrolaseHIMB100_00000060Not Available-4869 - 545622590.6
hypothetical proteinHIMB100_00000070Not Available+5668 - 620419114.0
hypothetical proteinHIMB100_00000080Not Available+6321 - 694122369.7
atpase involved in chromosome partitioningHIMB100_00000090Not Available+7049 - 777427030.4
ring-hydroxylating dioxygenase, large terminal subunitHIMB100_00000100Not Available-7792 - 892242064.4

Displaying genes 1 – 10 of 2376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

17 records
Metabolite IDMetabolite nameStructureCAS number
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm00034334-amino-4-deoxychorismateC10H10NO5Chemical structure of 4-amino-4-deoxychorismate133442-18-9
Average224.193Da
Monoisotopic224.056446006Da
BASm0003789S-sulfanylglutathioneC10H17N3O6S2Chemical structure of S-sulfanylglutathioneNot available
Average339.38Da
Monoisotopic339.0558776Da

Displaying 1–10 of 17 metabolites