Escherichia coli 97.0246

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 97.0246 is a Gram-negative, rod-shaped bacterium that typically exhibits a cell arrangement of singles and pairs. This strain thrives optimally at 37.0°C, a temperature that aligns with the human body, suggesting its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli 97.0246 can grow in both aerobic and anaerobic environments, allowing it to exploit a range of ecological niches within host organisms. The structural characteristics of this strain, particularly its Gram-negative cell wall composition, provide insights into its potential interactions within host systems. The outer membrane, containing lipopolysaccharides, may play a crucial role in mediating host responses and interactions. Additionally, the rod shape and ability to arrange in singles and pairs may enhance its motility and colonization efficiency within the host's gastrointestinal tract. Understanding the specific traits of Escherichia coli 97.0246 contributes to our broader knowledge of microbial diversity and host-microbe interactions. The strain's facultative anaerobic nature implies that it can adapt to varying oxygen levels within the host environment, potentially influencing its survival and competitive dynamics with other microbiota. This adaptability is pivotal for maintaining a balanced microbial ecosystem in the host, highlighting the ecological significance of this strain in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain97.0246

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 97.0246
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 97.0246


Gene Summary

Adenine Count

1358582 bp

Thymine Count

1357365 bp

Guanine Count

1391466 bp

Cytosine Count

1390054 bp

Genome Length

5497467 bp

Protein-coding Genes

5074 genes

Non-Coding Genes

924 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail proteinEC970246_4214Not Available-4254 - 454410778.8
Tail componentEC970246_4215Not Available-4513 - 537029474.8
Trna-met;Not AvailableNot Available+4510 - 4584Not Available
Trna-met;Not AvailableNot Available+4925 - 4999Not Available
rrna,type:16sNot AvailableNot Available+3497 - 503818.01
Head-tail joining proteinEC970246_4216Not Available-5367 - 55737613.19
rrna,type:5sNot AvailableNot Available+5416 - 553118.01
Dna packaging proteinEC970246_4217Not Available-5570 - 58038654.35
LysinEC970246_4218Not Available-5879 - 637617945.6
Holin protein s-like proteinEC970246_4219Not Available-6376 - 65917964.77

Displaying genes 1 – 10 of 5998 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

318 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 318 metabolites