Dermacoccus sp. Ellin185

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermacoccaceae

Genus

Dermacoccus

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusDermacoccus
SpeciesDermacoccus sp. Ellin185
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermacoccus sp. Ellin185

Accession NumberAEIQ00000000.1

Gene Summary

Adenine Count

483860 bp

Thymine Count

483132 bp

Guanine Count

1071075 bp

Cytosine Count

1077271 bp

Genome Length

3115364 bp

Protein-coding Genes

2919 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rdd family proteinHMPREF0321_1700Not Available+2340128 - 234082924871.6
hypothetical proteinHMPREF0321_1701Not Available-2340927 - 234147520135.7
rna methyltransferase, trmh family, group 3HMPREF0321_1702A1TG08-2341534 - 234250833831.3
cysteine--trna ligaseHMPREF0321_1703A6W6G0-2342508 - 234395953326.2
erfk/ybis/ycfs/ynhgHMPREF0321_1704Not Available-2344046 - 234540146368.8
metallo-beta-lactamase domain proteinHMPREF0321_1705O67893-2345421 - 234608022664.4
mycothiol-dependent formaldehyde dehydrogenaseHMPREF0321_1706P80094-2346077 - 234716237857.2
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseHMPREF0321_1707B8HCR6-2347362 - 234789217823.0
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseHMPREF0321_1708Q5Z2R3-2347889 - 234852121244.2
card-like proteinHMPREF0321_1709A0R561-2348614 - 234909617934.4

Displaying genes 2251 – 2260 of 2975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

237 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 237 metabolites