Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | AfiDRAFT_0937 | Not Available | + | 965355 - 966242 | 31788.4 |
| phosphomannomutase | AfiDRAFT_0938 | Not Available | - | 966250 - 967749 | 54568.6 |
| protein of unknown function duf938 | AfiDRAFT_0939 | Not Available | + | 967890 - 968492 | 21879.3 |
| retroviral aspartyl protease domain protein | AfiDRAFT_0940 | Not Available | - | 968503 - 969033 | 18949.8 |
| atp-dependent helicase hrpb | AfiDRAFT_0941 | Not Available | - | 969211 - 971685 | 89187.7 |
| nucleotide sugar dehydrogenase | AfiDRAFT_0942 | Not Available | - | 971719 - 973029 | 47008.7 |
| acyltransferase 3 | AfiDRAFT_0943 | Not Available | + | 973211 - 974272 | 39852.2 |
| conserved hypothetical protein | AfiDRAFT_0944 | Not Available | - | 974279 - 974872 | 23132.2 |
| dna polymerase i | AfiDRAFT_0945 | Not Available | + | 975000 - 978026 | 110739.0 |
| orotate phosphoribosyltransferase | AfiDRAFT_0946 | Not Available | + | 978144 - 978704 | 20007.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
