Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | AfiDRAFT_0927 | Not Available | - | 955625 - 956194 | 21387.9 |
| protein of unknown function duf195 | AfiDRAFT_0928 | Not Available | + | 956300 - 957505 | 44674.0 |
| major facilitator superfamily mfs_1 | AfiDRAFT_0929 | Not Available | + | 957554 - 958906 | 47857.6 |
| recombination protein recr | AfiDRAFT_0930 | Not Available | - | 958910 - 959515 | 21486.1 |
| conserved hypothetical protein | AfiDRAFT_0931 | Not Available | - | 959517 - 959834 | 11519.1 |
| dna polymerase iii, subunits gamma and tau | AfiDRAFT_0932 | Not Available | - | 959855 - 961705 | 66783.6 |
| histidine triad (hit) protein | AfiDRAFT_0933 | Not Available | + | 962084 - 962500 | 15584.8 |
| pfkb domain protein | AfiDRAFT_0934 | Not Available | + | 962601 - 963539 | 33027.8 |
| transcriptional regulator, asnc family | AfiDRAFT_0935 | Not Available | + | 963625 - 964140 | 18811.9 |
| uncharacterized protein family upf0324 | AfiDRAFT_0936 | Not Available | + | 964309 - 965346 | 35959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
