Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copc | AfiDRAFT_0898 | Not Available | - | 923371 - 923736 | 12930.5 |
| multicopper oxidase type 3 | AfiDRAFT_0899 | Not Available | - | 923769 - 925622 | 68257.9 |
| conserved hypothetical protein | AfiDRAFT_0900 | Not Available | - | 925773 - 926999 | 45080.5 |
| methyltransferase fkbm family | AfiDRAFT_0901 | Not Available | - | 927241 - 928218 | 35666.0 |
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_0902 | Not Available | - | 928288 - 928593 | 11013.7 |
| conserved hypothetical protein | AfiDRAFT_0903 | Not Available | - | 928606 - 929679 | 40660.9 |
| blue (type 1) copper domain protein | AfiDRAFT_0904 | Not Available | - | 929712 - 930194 | 17484.0 |
| multicopper oxidase type 3 | AfiDRAFT_0905 | Not Available | - | 930241 - 931623 | 50535.3 |
| outer membrane efflux protein | AfiDRAFT_0906 | Not Available | - | 931623 - 933080 | 53447.9 |
| conserved hypothetical protein | AfiDRAFT_0907 | Not Available | - | 933090 - 933389 | 9967.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
