Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rubrerythrin | AfiDRAFT_0888 | Not Available | - | 913385 - 914353 | 35846.3 |
| conserved hypothetical protein | AfiDRAFT_0889 | Not Available | + | 914483 - 914692 | 7997.76 |
| cytochrome c class i | AfiDRAFT_0890 | Not Available | - | 915507 - 916211 | 25529.8 |
| hypothetical protein | AfiDRAFT_0891 | Not Available | - | 916208 - 916342 | 4699.23 |
| heavy metal efflux pump, czca family | AfiDRAFT_0892 | Not Available | - | 916354 - 919539 | 115682.0 |
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_0893 | Not Available | - | 919601 - 920950 | 48654.3 |
| conserved hypothetical protein | AfiDRAFT_0894 | Not Available | - | 920947 - 921357 | 14433.8 |
| conserved hypothetical protein | AfiDRAFT_0895 | Not Available | - | 921453 - 921806 | 12355.2 |
| protein of unknown function duf411 | AfiDRAFT_0896 | Not Available | - | 921923 - 922396 | 16626.1 |
| copper resistance d domain protein | AfiDRAFT_0897 | Not Available | - | 922445 - 923371 | 32726.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
