Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | AfiDRAFT_0878 | Not Available | + | 898759 - 899982 | 44616.3 |
| periplasmic glucan biosynthesis protein mdog | AfiDRAFT_0879 | Not Available | + | 901017 - 902375 | 51283.5 |
| glycosyl transferase family 2 | AfiDRAFT_0880 | Not Available | + | 902363 - 904516 | 78551.1 |
| signal transduction histidine kinase | AfiDRAFT_0881 | Not Available | - | 904993 - 906201 | 43091.3 |
| cation diffusion facilitator family transporter | AfiDRAFT_0882 | Not Available | - | 906371 - 907636 | 45933.8 |
| protein of unknown function duf156 | AfiDRAFT_0883 | Not Available | - | 907646 - 907924 | 10363.7 |
| protein of unknown function duf156 | AfiDRAFT_0884 | Not Available | + | 908008 - 908286 | 10344.6 |
| efflux transporter, rnd family, mfp subunit | AfiDRAFT_0885 | Not Available | + | 908324 - 909538 | 43124.9 |
| heavy metal efflux pump, czca family | AfiDRAFT_0886 | Not Available | + | 909542 - 912781 | 115906.0 |
| cytochrome b561 | AfiDRAFT_0887 | Not Available | - | 912852 - 913382 | 20118.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
