Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integral membrane sensor signal transduction histidine kinase | AfiDRAFT_0868 | Not Available | - | 889135 - 890433 | 46448.9 |
| two component transcriptional regulator, winged helix family | AfiDRAFT_0869 | Not Available | - | 890430 - 891095 | 24319.4 |
| transcriptional regulator, rpir family | AfiDRAFT_0870 | Not Available | - | 891316 - 892137 | 29831.8 |
| mnth | AfiDRAFT_0871 | Not Available | + | 892303 - 893064 | 26210.8 |
| hypothetical protein | AfiDRAFT_0872 | Not Available | + | 893061 - 893276 | 7345.41 |
| conserved hypothetical protein | AfiDRAFT_0873 | Not Available | + | 893521 - 893829 | 12311.2 |
| 17 kda surface antigen | AfiDRAFT_0874 | Not Available | + | 893930 - 894247 | 10538.6 |
| peptidase c14 caspase catalytic subunit p20 | AfiDRAFT_0875 | Not Available | + | 894752 - 897277 | 88565.6 |
| hypothetical protein | AfiDRAFT_0876 | Not Available | - | 897605 - 898084 | 18135.0 |
| type iv pilus assembly pilz | AfiDRAFT_0877 | Not Available | + | 898122 - 898523 | 15106.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
