Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spovt/abrb domain protein | AfiDRAFT_0838 | Not Available | + | 863091 - 863351 | 9713.37 |
| pilt protein domain protein | AfiDRAFT_0839 | Not Available | + | 863348 - 863755 | 15033.0 |
| hypothetical protein | AfiDRAFT_0840 | Not Available | + | 863755 - 863946 | 7051.43 |
| p-type conjugative transfer atpase trbb | AfiDRAFT_0841 | Not Available | + | 864000 - 864980 | 34379.6 |
| conjugal transfer protein trbc | AfiDRAFT_0842 | Not Available | + | 864977 - 865309 | 11684.6 |
| conjugal transfer protein trbb | AfiDRAFT_0843 | Not Available | + | 865309 - 865590 | 9978.51 |
| cage, trbe, virb component of type iv transporter system, conserved region | AfiDRAFT_0844 | Not Available | + | 865604 - 868042 | 89562.0 |
| p-type conjugative transfer protein trbj | AfiDRAFT_0845 | Not Available | + | 868039 - 868794 | 27035.1 |
| conserved hypothetical protein | AfiDRAFT_0846 | Not Available | + | 868805 - 869092 | 10654.7 |
| p-type conjugative transfer protein trbl | AfiDRAFT_0847 | Not Available | + | 869096 - 870475 | 45337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
