Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exonuclease rnase t and dna polymerase iii | AfiDRAFT_0798 | Not Available | - | 827479 - 828372 | 33548.8 |
| protein of unknown function duf87 | AfiDRAFT_0799 | Not Available | - | 828372 - 830396 | 74591.2 |
| hypothetical protein | AfiDRAFT_0800 | Not Available | - | 830393 - 831979 | 59709.8 |
| conserved hypothetical protein | AfiDRAFT_0801 | Not Available | + | 832176 - 832454 | 11221.5 |
| transcriptional regulator, lysr family | AfiDRAFT_0802 | Not Available | - | 832616 - 833521 | 33210.1 |
| cupin 2 conserved barrel domain protein | AfiDRAFT_0803 | Not Available | + | 833661 - 834149 | 17341.6 |
| 4-oxalocrotonate tautomerase | AfiDRAFT_0804 | Not Available | + | 834153 - 834398 | 8971.58 |
| aldo/keto reductase | AfiDRAFT_0805 | Not Available | + | 834410 - 835300 | 31984.0 |
| short-chain dehydrogenase/reductase sdr | AfiDRAFT_0806 | Not Available | + | 835305 - 836072 | 26181.6 |
| carboxymuconolactone decarboxylase | AfiDRAFT_0807 | Not Available | + | 836165 - 836491 | 12097.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
