Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein transmembrane region | AfiDRAFT_0738 | Not Available | - | 769886 - 770605 | 24163.1 |
| thioredoxin domain protein | AfiDRAFT_0739 | Not Available | - | 770607 - 770987 | 13750.7 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | AfiDRAFT_0740 | Not Available | + | 771138 - 771698 | 20555.7 |
| redoxin domain protein | AfiDRAFT_0741 | Not Available | - | 771712 - 772344 | 22642.3 |
| conserved hypothetical protein | AfiDRAFT_0742 | Not Available | - | 772341 - 772670 | 12500.3 |
| conserved hypothetical protein | AfiDRAFT_0743 | Not Available | + | 772824 - 773282 | 16178.8 |
| hypothetical protein | AfiDRAFT_0744 | Not Available | - | 773515 - 773682 | 6069.53 |
| protein of unknown function duf214 | AfiDRAFT_0745 | Not Available | - | 774669 - 775862 | 42532.4 |
| secretion protein hlyd family protein | AfiDRAFT_0746 | Not Available | - | 775864 - 776787 | 33192.0 |
| abc transporter related protein | AfiDRAFT_0747 | Not Available | - | 776784 - 777380 | 21581.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
