Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | AfiDRAFT_0708 | Not Available | + | 735829 - 736806 | 36186.9 |
| l-carnitine dehydratase/bile acid-inducible protein f | AfiDRAFT_0709 | Not Available | - | 736750 - 737901 | 40873.5 |
| acyl-coa dehydrogenase domain protein | AfiDRAFT_0710 | Not Available | - | 737898 - 739085 | 42495.1 |
| l-carnitine dehydratase/bile acid-inducible protein f | AfiDRAFT_0711 | Not Available | - | 739160 - 740344 | 43070.5 |
| enoyl-coa hydratase/isomerase | AfiDRAFT_0712 | Not Available | + | 740542 - 741291 | 26579.3 |
| protein of unknown function duf224 cysteine-rich region domain protein | AfiDRAFT_0713 | Not Available | - | 741606 - 742907 | 47473.7 |
| fad linked oxidase domain protein | AfiDRAFT_0714 | Not Available | - | 742909 - 744066 | 40774.0 |
| fad linked oxidase domain protein | AfiDRAFT_0715 | Not Available | - | 744063 - 745520 | 51581.6 |
| gntr domain protein | AfiDRAFT_0716 | Not Available | + | 745703 - 746482 | 28717.6 |
| transposase | AfiDRAFT_0717 | Not Available | - | 746759 - 746869 | 4121.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
