Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | AfiDRAFT_0678 | Not Available | - | 702192 - 703106 | 33050.1 |
| protein of unknown function duf1794 | AfiDRAFT_0679 | Not Available | + | 703752 - 704354 | 22756.8 |
| phage integrase | AfiDRAFT_0680 | Not Available | + | 704460 - 705077 | 22995.7 |
| integrase catalytic region | AfiDRAFT_0681 | Not Available | - | 705093 - 706019 | 34887.9 |
| transposase is3/is911 family protein | AfiDRAFT_0682 | Not Available | - | 706013 - 706279 | 10067.2 |
| diguanylate cyclase/phosphodiesterase | AfiDRAFT_0683 | Not Available | - | 706535 - 708013 | 55194.1 |
| sensory box/ggdef family protein | AfiDRAFT_0684 | Not Available | - | 708549 - 709229 | 25109.6 |
| hypothetical protein | AfiDRAFT_0685 | Not Available | + | 709606 - 709842 | 8110.95 |
| conserved hypothetical protein | AfiDRAFT_0686 | Not Available | - | 710295 - 710954 | 24127.6 |
| hypothetical protein | AfiDRAFT_0687 | Not Available | + | 711407 - 711601 | 7092.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
