Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator, crp/fnr family | AfiDRAFT_0668 | Not Available | - | 690597 - 691823 | 44979.6 |
| thymidine phosphorylase | AfiDRAFT_0669 | Not Available | + | 692034 - 693593 | 55789.7 |
| rna-metabolising metallo-beta-lactamase | AfiDRAFT_0670 | Not Available | + | 693603 - 695195 | 58732.4 |
| response regulator receiver protein | AfiDRAFT_0671 | Not Available | - | 695279 - 695683 | 15186.5 |
| putative signal transduction protein with cbs domains | AfiDRAFT_0672 | Not Available | + | 696066 - 696752 | 25485.8 |
| uspa domain protein | AfiDRAFT_0673 | Not Available | + | 697012 - 697857 | 30783.4 |
| atpase, p-type (transporting), had superfamily, subfamily ic | AfiDRAFT_0674 | Not Available | + | 697886 - 700420 | 90537.3 |
| ef-hand domain protein | AfiDRAFT_0675 | Not Available | + | 700663 - 701082 | 15217.2 |
| conserved hypothetical protein | AfiDRAFT_0676 | Not Available | + | 701124 - 701348 | 8450.6 |
| integrase family protein | AfiDRAFT_0677 | Not Available | + | 701696 - 701941 | 9198.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
