Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flp/fap pilin component | AfiDRAFT_0608 | Not Available | + | 621242 - 621412 | 5725.01 |
| peptidase a24a prepilin type iv | AfiDRAFT_0609 | Not Available | + | 621702 - 622226 | 18824.5 |
| type ii and iii secretion system protein | AfiDRAFT_0610 | Not Available | + | 622342 - 623814 | 51695.0 |
| pilus biogenesis lipoprotein cpad | AfiDRAFT_0611 | Not Available | + | 623835 - 624575 | 26357.4 |
| pilus assembly protein | AfiDRAFT_0612 | Not Available | + | 624572 - 625837 | 45208.2 |
| type ii secretion system protein e | AfiDRAFT_0613 | Not Available | + | 625856 - 627322 | 53238.1 |
| type ii secretion system f domain protein | AfiDRAFT_0614 | Not Available | + | 627334 - 628305 | 35882.6 |
| type ii secretion system f domain protein | AfiDRAFT_0615 | Not Available | + | 628316 - 629293 | 36542.6 |
| tetratricopeptide tpr_2 repeat protein | AfiDRAFT_0616 | Not Available | - | 629358 - 630167 | 28792.2 |
| peptidase m17 leucyl aminopeptidase domain protein | AfiDRAFT_0617 | Not Available | + | 630321 - 631697 | 48739.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
