Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_0598 | Not Available | + | 613281 - 613829 | 19918.5 |
| signal transduction histidine kinase | AfiDRAFT_0599 | Not Available | - | 613935 - 615575 | 59659.6 |
| conserved hypothetical protein | AfiDRAFT_0600 | Not Available | - | 615899 - 616012 | 4237.59 |
| dead/deah box helicase domain protein | AfiDRAFT_0601 | Not Available | + | 616373 - 617902 | 55383.3 |
| translation initiation factor if-1 | AfiDRAFT_0602 | Not Available | + | 617921 - 618202 | 10634.9 |
| cold-shock dna-binding domain protein | AfiDRAFT_0603 | Not Available | + | 618424 - 618636 | 7505.81 |
| flp pilus assembly protein tadg | AfiDRAFT_0604 | Not Available | - | 618757 - 619341 | 20793.1 |
| tade family protein | AfiDRAFT_0605 | Not Available | - | 619362 - 619907 | 19913.1 |
| flp pilus assembly protein cpab | AfiDRAFT_0606 | Not Available | - | 620055 - 620876 | 28683.1 |
| hypothetical protein | AfiDRAFT_0607 | Not Available | - | 621129 - 621227 | 3827.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
