Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AfiDRAFT_0568 | Not Available | - | 584370 - 584888 | 17624.9 |
| deda family | AfiDRAFT_0569 | Not Available | - | 585003 - 585584 | 21247.3 |
| phosphoribosyl-atp diphosphatase | AfiDRAFT_0570 | Not Available | - | 585647 - 586039 | 14316.3 |
| conserved hypothetical protein | AfiDRAFT_0571 | Not Available | - | 586160 - 586561 | 14278.8 |
| glucan exporter atp-binding protein | AfiDRAFT_0572 | Not Available | + | 586753 - 588555 | 65941.4 |
| serine-type d-ala-d-ala carboxypeptidase | AfiDRAFT_0573 | Not Available | + | 588792 - 590219 | 49612.6 |
| amp-dependent synthetase and ligase | AfiDRAFT_0574 | Not Available | + | 590364 - 592046 | 61061.8 |
| protein of unknown function duf924 | AfiDRAFT_0575 | Not Available | + | 592050 - 592598 | 20682.3 |
| multi antimicrobial extrusion protein mate | AfiDRAFT_0576 | Not Available | + | 592745 - 594055 | 47370.9 |
| 3-hydroxybutyrate dehydrogenase | AfiDRAFT_0577 | Not Available | - | 594065 - 594853 | 27512.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
