Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein family 3 | AfiDRAFT_0559 | Not Available | - | 574094 - 575062 | 34816.4 |
| two component, sigma54 specific, transcriptional regulator, fis family | AfiDRAFT_0560 | Not Available | - | 575345 - 576703 | 50048.6 |
| integral membrane sensor signal transduction histidine kinase | AfiDRAFT_0561 | Not Available | - | 576696 - 578564 | 68143.6 |
| conserved hypothetical protein | AfiDRAFT_0562 | Not Available | - | 578900 - 579385 | 15978.0 |
| conserved hypothetical protein | AfiDRAFT_0563 | Not Available | + | 579558 - 579782 | 7792.47 |
| disulfide bond formation protein dsbb | AfiDRAFT_0564 | Not Available | - | 579877 - 580359 | 16865.8 |
| Trna-leu | Not Available | Not Available | + | 580549 - 580633 | Not Available |
| methyl-accepting chemotaxis sensory transducer | AfiDRAFT_0565 | Not Available | - | 580778 - 582496 | 60164.8 |
| conserved hypothetical protein | AfiDRAFT_0566 | Not Available | + | 582790 - 583044 | 9507.26 |
| diguanylate cyclase | AfiDRAFT_0567 | Not Available | - | 583052 - 584086 | 38017.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
