Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone clpb | AfiDRAFT_0519 | Not Available | - | 534588 - 537221 | 96127.3 |
| mosc domain containing protein | AfiDRAFT_0520 | Not Available | + | 537434 - 538204 | 28271.0 |
| chap domain containing protein | AfiDRAFT_0521 | Not Available | - | 538201 - 538821 | 21959.2 |
| methionine biosynthesis protein metw | AfiDRAFT_0522 | Not Available | - | 539015 - 539668 | 24328.3 |
| homoserine o-acetyltransferase | AfiDRAFT_0523 | Not Available | - | 539670 - 540878 | 43919.8 |
| chorismate mutase, type ii | AfiDRAFT_0524 | Not Available | + | 541154 - 542002 | 30321.2 |
| histidinol-phosphate aminotransferase | AfiDRAFT_0525 | Not Available | + | 542020 - 543114 | 38711.6 |
| prephenate dehydrogenase | AfiDRAFT_0526 | Not Available | + | 543111 - 544073 | 34162.0 |
| protein of unknown function duf2125 | AfiDRAFT_0527 | Not Available | - | 544083 - 545282 | 43112.0 |
| chac family protein | AfiDRAFT_0528 | Not Available | + | 545392 - 545976 | 21815.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
